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Skills harvested from GitHub repositories
14810 skills availabletime-resolved-cryoem-agent
The Time-Resolved Cryo-EM Agent leverages time-resolved cryo-electron microscopy to capture protein dynamics, drug-bindi...
tiledbvcf
TileDB-VCF is a high-performance C++ library with Python and CLI interfaces for efficient storage and retrieval of genom...
systematic-debugging
Random fixes waste time and create new bugs. Quick patches mask underlying issues. Core principle: ALWAYS find root caus...
tcr-pmhc-prediction-agent
The TCR-pMHC Prediction Agent predicts T-cell receptor interactions with peptide-MHC complexes using AlphaFold3-based st...
subagent-driven-development
Execute plan by dispatching fresh subagent per task, with two-stage review after each: spec compliance review first, the...
string-database
STRING is a comprehensive database of known and predicted protein-protein interactions covering 59M proteins and 20B+ in...
statistical-analysis
Statistical analysis is a systematic process for testing hypotheses and quantifying relationships. Conduct hypothesis te...
speech-pathology-ai
You are an expert speech-language pathologist (SLP) with deep knowledge of phonetics, articulation disorders, voice ther...
spatial-transcriptomics-agent
Run STAgent to align histology images with expression matrices, perform clustering/SVG detection, and generate literatur...
spatial-agent
SpatialAgent focuses on the biological interpretation of spatial transcriptomics data, specifically aiming to propose me...
solublempnn
| Requirement | Minimum | Recommended | |-------------|---------|-------------| | Python | 3.8+ | 3.10 | | CUDA | 11.0+ ...
slurm-job-script-generator
Generate a correct, copy-pasteable SLURM job script (.sbatch) for running a simulation, and surface common configuration...
sleep-analyzer
分析睡眠数据，识别睡眠模式，评估睡眠质量，并提供个性化睡眠改善建议。 分析睡眠时长、质量、效率的变化趋势，识别改善或需要关注的方面。 分析维度： 睡眠时长趋势（平均睡眠时长变化） 睡眠效率趋势（睡眠效率百分比变化） 入睡时间模式（上床时间、...
single-trajectory
This skill describes how to reproduce and extend the single-trajectory analysis workflow in omicverse, combining graph-b...
single-to-spatial-mapping
Apply this skill when converting single-cell references into spatially resolved profiles. It follows tsingle2spatial.ipy...
single-multiomics
This skill walk-through summarizes the OmicVerse notebooks that cover paired and unpaired multi-omic integration, multi-...
single-downstream-analysis
This skill sheet distills the OmicVerse single-cell downstream tutorials into an executable checklist. Each module highl...
single-cellphone-db
Apply this skill when a user wants to quantify ligand–receptor communication between annotated single-cell populations a...
single-cell-rna-qc
Automated QC workflow for single-cell RNA-seq data following scverse best practices. Use when users: Request quality con...
single-annotation
Use this skill to reproduce and adapt the single-cell annotation playbook captured in omicverse tutorials: SCSA tcellann...
simulation-validator
Provide a three-stage validation protocol: pre-flight checks, runtime monitoring, and post-flight validation for materia...
scrna-qc
description (10-20 chars): QC autopilot keywords: scRNAseq, MAD, h5ad, QC, plots Accept .h5ad, 10x .h5, or 10x directory...
scrna-orchestrator
You are scRNA Orchestrator, a specialised ClawBio agent for local single-cell RNA-seq analysis with Scanpy. Single-cell ...
scikit-learn
This skill provides comprehensive guidance for machine learning tasks using scikit-learn, the industry-standard Python l...