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14810 skills availablebio-alignment-indexing
Create indices for random access to alignment files using samtools and pysam. | Index | Extension | Use Case | |-------|...
bio-alignment-filtering
Filter alignments by flags, quality, and regions using samtools and pysam. | Option | Description | |--------|----------...
bio-alignment-files-bam-statistics
Generate alignment statistics using samtools and pysam. | Command | Output | Speed | |---------|--------|-------| | flag...
bio-admet-prediction
Reference examples tested with: RDKit 2024.03+, pandas 2.2+ Before using code patterns, verify installed versions match....
binder-design
De novo binder design? ├─ Standard target → BoltzGen (recommended) │ All-atom output (no separate ProteinMPNN step nee...
bindcraft
| Requirement | Minimum | Recommended | |-------------|---------|-------------| | Python | 3.9+ | 3.10 | | CUDA | 11.7+ ...
autonomous-oncology-agent
This skill implements the capabilities of the "Autonomous Clinical AI Agent" described in Nature Cancer (2025). It combi...
bgpt-paper-search
BGPT is a remote MCP server that searches a curated database of scientific papers built from raw experimental data extra...
armored-cart-design-agent
The Armored CAR-T Design Agent provides AI-assisted design of next-generation armored CAR-T cells engineered to express ...
arboreto
Arboreto is a computational library for inferring gene regulatory networks (GRNs) from gene expression data using parall...
antibody-design-agent
This skill brings together cutting-edge tools for antibody engineering, including MAGE (Monoclonal Antibody Generator) a...
alphafold-database
AlphaFold DB is a public repository of AI-predicted 3D protein structures for over 200 million proteins, maintained by D...
aeon
Aeon is a scikit-learn compatible Python toolkit for time series machine learning. It provides state-of-the-art algorith...
agent-browser
agent-browser open <url> # Navigate to page agent-browser snapshot -i # Get interactive elements with refs ...
adhd-daily-planner
A planning system designed BY and FOR ADHD brains. This skill understands that traditional productivity advice fails for...
aav-vector-design-agent
The AAV Vector Design Agent provides AI-driven design of adeno-associated virus vectors for gene therapy applications. I...
bio-population-genetics-scikit-allel-analysis
Python library for population genetics analysis with efficient array data structures. pip install scikit-allel pip insta...
bio-proteomics-ptm-analysis
Reference examples tested with: numpy 1.26+, pandas 2.2+, scipy 1.12+ Before using code patterns, verify installed versi...
bio-variant-calling-structural-variant-calling
Reference examples tested with: bcftools 1.19+, samtools 1.19+ Before using code patterns, verify installed versions mat...
bio-proteomics-peptide-identification
Reference examples tested with: MSnbase 2.28+ Before using code patterns, verify installed versions match. If versions d...
STAgent
Run STAgent to align histology images with expression matrices, perform clustering/SVG detection, and generate literatur...
spatial-transcriptomics-analysis
Version: 1.0.0 Author: MD BABU MIA, PhD Date: February 2026 This skill provides automated analysis capabilities for Spat...
bio-atac-seq-footprinting
Reference examples tested with: bedtools 2.31+, matplotlib 3.8+, numpy 1.26+, pandas 2.2+, pyBigWig 0.3+, samtools 1.19+...
bio-transcription-translation
Convert between DNA, RNA, and protein sequences using Biopython. from Bio.Seq import Seq dna = Seq('ATGCGATCGATCG') rna ...