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14810 skills availablebio-pdb-structure-navigation
Reference examples tested with: BioPython 1.83+ Before using code patterns, verify installed versions match. If versions...
latex-posters
Research posters are a critical medium for scientific communication at conferences, symposia, and academic events. This ...
bio-workflows-metabolic-modeling-pipeline
Complete workflow for genome-scale metabolic modeling: from protein sequences to flux predictions and phenotype analysis...
bio-atac-seq-atac-qc
Reference examples tested with: bedtools 2.31+, deepTools 3.5+, numpy 1.26+, pandas 2.2+, picard 3.1+, pyBigWig 0.3+, py...
biomni-general-agent
description (10-20 chars): Omni bio agent keywords: multi-tool, know-how, tutorials, protocols, databases measurableoutc...
bio-copy-number-cnvkit-analysis
Reference examples tested with: GATK 4.5+, bedtools 2.31+ Before using code patterns, verify installed versions match. I...
family-health-analyzer
本技能提供家庭健康数据的深度分析,包括: 遗传风险评估 家族疾病模式识别 家庭共同问题分析 个性化预防建议 可视化报告生成 当用户请求以下内容时,使用此技能: "家庭健康报告" "家族病史分析" "遗传风险评估" "家庭健康趋势" 执行 /...
bio-crispr-screens-hit-calling
Reference examples tested with: MAGeCK 0.5+, matplotlib 3.8+, numpy 1.26+, pandas 2.2+, scipy 1.12+, statsmodels 0.14+ B...
bulk-wgcna-analysis
Activate this skill for users who want to reproduce the WGCNA workflow from twgcna.ipynb. It guides you through loading ...
bio-read-alignment-hisat2-alignment
hisat2-build -p 8 reference.fa hisat2index hisat2extractsplicesites.py annotation.gtf > splicesites.txt hisat2extractexo...
medical-research-toolkit
Query 14+ biomedical databases for drug repurposing, target discovery, clinical evidence, and literature research — all ...
bio-spatial-transcriptomics-spatial-preprocessing
Reference examples tested with: matplotlib 3.8+, numpy 1.26+, scanpy 1.10+, squidpy 1.3+ Before using code patterns, ver...
convergence-study
Provide script-driven convergence analysis for verifying that numerical solutions converge at the expected rate as the m...
bio-proteomics-data-import
Reference examples tested with: MSnbase 2.28+, pandas 2.2+ Before using code patterns, verify installed versions match. ...
bio-clinical-databases-clinvar-lookup
Reference examples tested with: Entrez Direct 21.0+, bcftools 1.19+ Before using code patterns, verify installed version...
proteinmpnn
| Requirement | Minimum | Recommended | |-------------|---------|-------------| | Python | 3.8+ | 3.10 | | CUDA | 11.0+ ...
tooluniverse-chemical-safety
Comprehensive chemical safety and toxicology analysis integrating predictive AI models, curated toxicogenomics databases...
medical-imaging-review
Write comprehensive literature reviews following a systematic 7-phase workflow. Initialize project with three core files...
filtering-best-practices
Is dataset large enough for VQSR? (>30 exomes or WGS) ├── Yes → Use VQSR (machine learning) └── No → Use hard filters ├─...
chai
| Requirement | Minimum | Recommended | |-------------|---------|-------------| | Python | 3.10+ | 3.11 | | CUDA | 12.0+...
clinical-reports
Clinical report writing is the process of documenting medical information with precision, accuracy, and compliance with ...
bio-local-blast
Run BLAST searches locally using NCBI BLAST+ command-line tools. brew install blast sudo apt install ncbi-blast+ conda i...
bioinformatics-singlecell
import scanpy as sc import anndata as ad import scvi import muon as mu import pandas as pd import numpy as np import mat...
pytdc
PyTDC is an open-science platform providing AI-ready datasets and benchmarks for drug discovery and development. Access ...