GitHub

omero-integration

OMERO is an open-source platform for managing, visualizing, and analyzing microscopy images and metadata. Access images ...

by K-Dense-AI

github

neuropixels-analysis

Comprehensive toolkit for analyzing Neuropixels high-density neural recordings using current best practices from SpikeIn...

by K-Dense-AI

github

neurokit2

NeuroKit2 is a comprehensive Python toolkit for processing and analyzing physiological signals (biosignals). Use this sk...

by K-Dense-AI

github

networkx

NetworkX is a Python package for creating, manipulating, and analyzing complex networks and graphs. Use this skill when ...

by K-Dense-AI

github

molfeat

Molfeat is a comprehensive Python library for molecular featurization that unifies 100+ pre-trained embeddings and hand-...

by K-Dense-AI

github

molecular-dynamics

Molecular dynamics (MD) simulation computationally models the time evolution of molecular systems by integrating Newton'...

by K-Dense-AI

github

modal

Modal is a cloud platform for running Python code serverlessly, with a focus on AI/ML workloads. Key capabilities: GPU c...

by K-Dense-AI

github

medchem

Medchem is a Python library for molecular filtering and prioritization in drug discovery workflows. Apply hundreds of we...

by K-Dense-AI

github

matplotlib

Matplotlib is Python's foundational visualization library for creating static, animated, and interactive plots. This ski...

by K-Dense-AI

github

matlab

MATLAB is a numerical computing environment optimized for matrix operations and scientific computing. GNU Octave is a fr...

by K-Dense-AI

github

matchms

Matchms is an open-source Python library for mass spectrometry data processing and analysis. Import spectra from various...

by K-Dense-AI

github

markdown-mermaid-writing

This skill teaches you — and enforces a standard for — creating scientific documentation using markdown with embedded Me...

by K-Dense-AI

github

lamindb

LaminDB is an open-source data framework for biology designed to make data queryable, traceable, reproducible, and FAIR ...

by K-Dense-AI

github

labarchive-integration

LabArchives is an electronic lab notebook platform for research documentation and data management. Access notebooks, man...

by K-Dense-AI

github

iso-13485-certification

This skill helps medical device manufacturers prepare comprehensive documentation for ISO 13485:2016 certification. It p...

by K-Dense-AI

github

imaging-data-commons

Use the idc-index Python package to query and download public cancer imaging data from the National Cancer Institute Ima...

by K-Dense-AI

github

hypogenic

Hypogenic provides automated hypothesis generation and testing using large language models to accelerate scientific disc...

by K-Dense-AI

github

histolab

Histolab is a Python library for processing whole slide images (WSI) in digital pathology. It automates tissue detection...

by K-Dense-AI

github

glycoengineering

Glycosylation is the most common and complex post-translational modification (PTM) of proteins, affecting over 50% of al...

by K-Dense-AI

github

ginkgo-cloud-lab

Ginkgo Cloud Lab (https://cloud.ginkgo.bio) provides remote access to Ginkgo Bioworks' autonomous lab infrastructure. Pr...

by K-Dense-AI

github

gget

gget is a command-line bioinformatics tool and Python package providing unified access to 20+ genomic databases and anal...

by K-Dense-AI

github

get-available-resources

Detect available computational resources and generate strategic recommendations for scientific computing tasks. This ski...

by K-Dense-AI

github

geopandas

GeoPandas extends pandas to enable spatial operations on geometric types. It combines the capabilities of pandas and sha...

by K-Dense-AI

github

geomaster

Comprehensive geospatial science skill covering GIS, remote sensing, spatial analysis, and ML for Earth observation acro...

by K-Dense-AI

github