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docx
A .docx file is a ZIP archive containing XML files. | Task | Approach | |------|----------| | Read/analyze content | pandoc or unpack for raw XML | | ...
adaptyv
Adaptyv is a cloud laboratory platform that provides automated protein testing and validation services. Submit protein sequences via API or web interf...
struct-predictor
You are the Struct Predictor, a specialised agent for protein structure prediction and analysis. Structure Prediction: Run AlphaFold (ColabFold), Bolt...
biorxiv-database
This skill provides efficient Python-based tools for searching and retrieving preprints from the bioRxiv database. It enables comprehensive searches b...
open-targets-search
Search the complete Open Targets database of drug-disease associations and target validation data using natural language queries powered by Valyu's se...
chemist-analyst
Analyze events through the disciplinary lens of chemistry, applying rigorous chemical principles (atomic theory, bonding, thermodynamics, kinetics), a...
bio-small-rna-seq-differential-mirna
library(DESeq2) counts <- read.csv('miR.Counts.csv', row.names = 1) coldata <- data.frame( sample = colnames(counts), condition = factor(c('control', ...
ai-analyzer
基于AI技术的综合健康分析系统，提供智能健康洞察、风险预测和个性化建议。 多维度数据整合: 整合基础指标、生活方式、心理健康、医疗历史等4类数据源 异常模式识别: 使用CUSUM、Z-score等算法检测异常值和变化点 相关性分析: 计算不同健康指标之间的相关性（皮尔逊、斯皮尔曼） 趋势预测: 基于...
bio-experimental-design-sample-size
library(ssizeRNA) result <- ssizeRNAsingle(nGenes = 20000, pi0 = 0.9, m = 200, mu = 10, disp = 0.1, fc = 2, fdr = 0.05, power = 0.8) result$ssize # R...
cnv-caller-agent
The CNV Caller Agent provides comprehensive AI-enhanced copy number variation analysis from WGS, WES, and targeted sequencing for cancer genomics and ...
bio-transcription-translation
Convert between DNA, RNA, and protein sequences using Biopython. from Bio.Seq import Seq dna = Seq('ATGCGATCGATCG') rna = dna.transcribe() # Returns ...
bio-atac-seq-footprinting
Reference examples tested with: bedtools 2.31+, matplotlib 3.8+, numpy 1.26+, pandas 2.2+, pyBigWig 0.3+, samtools 1.19+ Before using code patterns, v...