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bio-proteomics-data-import
Reference examples tested with: MSnbase 2.28+, pandas 2.2+ Before using code patterns, verify installed versions match. If versions differ: Python: pi...
convergence-study
Provide script-driven convergence analysis for verifying that numerical solutions converge at the expected rate as the mesh or timestep is refined. Py...
bio-spatial-transcriptomics-spatial-preprocessing
Reference examples tested with: matplotlib 3.8+, numpy 1.26+, scanpy 1.10+, squidpy 1.3+ Before using code patterns, verify installed versions match. ...
medical-research-toolkit
Query 14+ biomedical databases for drug repurposing, target discovery, clinical evidence, and literature research — all via a unified MCP endpoint. cu...
bio-read-alignment-hisat2-alignment
hisat2-build -p 8 reference.fa hisat2index hisat2extractsplicesites.py annotation.gtf > splicesites.txt hisat2extractexons.py annotation.gtf > exons.t...
bulk-wgcna-analysis
Activate this skill for users who want to reproduce the WGCNA workflow from twgcna.ipynb. It guides you through loading expression data, configuring P...
bio-crispr-screens-hit-calling
Reference examples tested with: MAGeCK 0.5+, matplotlib 3.8+, numpy 1.26+, pandas 2.2+, scipy 1.12+, statsmodels 0.14+ Before using code patterns, ver...
bio-copy-number-cnvkit-analysis
Reference examples tested with: GATK 4.5+, bedtools 2.31+ Before using code patterns, verify installed versions match. If versions differ: Python: pip...
family-health-analyzer
本技能提供家庭健康数据的深度分析,包括: 遗传风险评估 家族疾病模式识别 家庭共同问题分析 个性化预防建议 可视化报告生成 当用户请求以下内容时,使用此技能: "家庭健康报告" "家族病史分析" "遗传风险评估" "家庭健康趋势" 执行 /family report 命令 执行 /family ri...
biomni-general-agent
description (10-20 chars): Omni bio agent keywords: multi-tool, know-how, tutorials, protocols, databases measurableoutcome: Execute a Biomni workflow...
bio-atac-seq-atac-qc
Reference examples tested with: bedtools 2.31+, deepTools 3.5+, numpy 1.26+, pandas 2.2+, picard 3.1+, pyBigWig 0.3+, pysam 0.22+, samtools 1.19+ Befo...
bio-workflows-metabolic-modeling-pipeline
Complete workflow for genome-scale metabolic modeling: from protein sequences to flux predictions and phenotype analysis. Protein FASTA (genome annota...