Search Skills
Search across 54932 indexed skills
scrna-orchestrator
You are scRNA Orchestrator, a specialised ClawBio agent for local single-cell RNA-seq analysis with Scanpy. Single-cell workflows are easy to misconfi...
scrna-qc
description (10-20 chars): QC autopilot keywords: scRNAseq, MAD, h5ad, QC, plots Accept .h5ad, 10x .h5, or 10x directory inputs; set mitochondrial/rib...
simulation-validator
Provide a three-stage validation protocol: pre-flight checks, runtime monitoring, and post-flight validation for materials simulations. Python 3.8+ No...
single-annotation
Use this skill to reproduce and adapt the single-cell annotation playbook captured in omicverse tutorials: SCSA tcellanno.ipynb, MetaTiME tmetatime.ip...
single-cell-rna-qc
Automated QC workflow for single-cell RNA-seq data following scverse best practices. Use when users: Request quality control or QC on single-cell RNA-...
single-cellphone-db
Apply this skill when a user wants to quantify ligand–receptor communication between annotated single-cell populations and display the networks with C...
single-downstream-analysis
This skill sheet distills the OmicVerse single-cell downstream tutorials into an executable checklist. Each module highlights prerequisites, the core ...
single-multiomics
This skill walk-through summarizes the OmicVerse notebooks that cover paired and unpaired multi-omic integration, multi-batch embedding, reference tra...
single-to-spatial-mapping
Apply this skill when converting single-cell references into spatially resolved profiles. It follows tsingle2spatial.ipynb, demonstrating how Single2S...
single-trajectory
This skill describes how to reproduce and extend the single-trajectory analysis workflow in omicverse, combining graph-based trajectory inference, RNA...
sleep-analyzer
分析睡眠数据，识别睡眠模式，评估睡眠质量，并提供个性化睡眠改善建议。 分析睡眠时长、质量、效率的变化趋势，识别改善或需要关注的方面。 分析维度： 睡眠时长趋势（平均睡眠时长变化） 睡眠效率趋势（睡眠效率百分比变化） 入睡时间模式（上床时间、入睡时间、起床时间） 作息规律性评分（sleep consi...
slurm-job-script-generator
Generate a correct, copy-pasteable SLURM job script (.sbatch) for running a simulation, and surface common configuration mistakes (bad walltime format...