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bio-chipseq-motif-analysis
Reference examples tested with: BioPython 1.83+, bedtools 2.31+, matplotlib 3.8+, pandas 2.2+ Before using code patterns, verify installed versions ma...
medea-therapeutic-discovery
Medea is a multi-stage AI agent designed for therapeutic discovery, modeled after 2026 state-of-the-art open source architectures. It executes transpa...
bio-imaging-mass-cytometry-spatial-analysis
Reference examples tested with: anndata 0.10+, matplotlib 3.8+, numpy 1.26+, pandas 2.2+, scanpy 1.10+, scipy 1.12+, squidpy 1.3+ Before using code pa...
bio-de-visualization
Reference examples tested with: DESeq2 1.42+, edgeR 4.0+, ggplot2 3.5+, limma 3.58+, matplotlib 3.8+ Before using code patterns, verify installed vers...
molecular-dynamics
Molecular dynamics (MD) simulation computationally models the time evolution of molecular systems by integrating Newton's equations of motion. This sk...
bio-primer-design-primer-basics
Design PCR primers using primer3-py, the Python binding for Primer3. import primer3 from primer3 import p3helpers from Bio import SeqIO from Bio.Seq i...
wellally-tech
Integrate multiple digital health data sources, connect to WellAlly.tech knowledge base, providing data import and knowledge reference for personal he...
crispr-offtarget-predictor
This skill identifies potential off-target binding sites for a specific sgRNA sequence. It helps researchers assess the specificity of their CRISPR de...
mpn-research-assistant
Polycythemia Vera (PV): JAK2V617F (95%), JAK2 exon 12 (3%) Essential Thrombocythemia (ET): JAK2V617F (55%), CALR (25%), MPL (5%) Primary Myelofibrosis...
bio-systems-biology-context-specific-models
import cobra import numpy as np def gimme(model, expressiondata, threshold=0.25, requiredgrowth=0.1): '''Gene Inactivity Moderated by Metabolism and E...
bone-marrow-ai-agent
The Bone Marrow AI Agent provides comprehensive AI-driven analysis of bone marrow aspirate and biopsy specimens. It performs automated cell identifica...
tooluniverse-epigenomics
Production-ready computational skill for processing and analyzing epigenomics data. Combines local Python computation (pandas, scipy, numpy, pysam, st...