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writing-skills
Writing skills IS Test-Driven Development applied to process documentation. Personal skills live in agent-specific directories (/.claude/skills for Cl...
radiomics-pathomics-fusion-agent
The Radiomics Pathomics Fusion Agent integrates multimodal medical imaging data from radiology (CT, MRI, PET) and digital pathology (H&E, IHC whole sl...
lamindb
LaminDB is an open-source data framework for biology designed to make data queryable, traceable, reproducible, and FAIR (Findable, Accessible, Interop...
research-grants
Research grant writing is the process of developing competitive funding proposals for federal agencies and foundations. Master agency-specific require...
bio-blast-searches
Run BLAST searches against NCBI databases using Biopython's Bio.Blast module. from Bio.Blast import NCBIWWW, NCBIXML from Bio import SeqIO | Program |...
bio-bedgraph-handling
bedGraph is a text format for displaying continuous-valued data on genome browsers. Common for coverage, signal intensity, and scores. track type=bedG...
arxiv-search
Search the complete arXiv database of preprints across physics, mathematics, computer science, and quantitative biology using natural language queries...
bio-genome-engineering-base-editing-design
Reference examples tested with: BioPython 1.83+ Before using code patterns, verify installed versions match. If versions differ: Python: pip show <pac...
torch-geometric
PyTorch Geometric is a library built on PyTorch for developing and training Graph Neural Networks (GNNs). Apply this skill for deep learning on graphs...
bayesian-optimizer
The Bayesian Optimizer allows agents to efficiently explore a parameter space to maximize a target metric (yield, purity, binding affinity) with minim...
bio-genome-assembly-long-read-assembly
Assemble genomes from Oxford Nanopore (ONT) or PacBio long reads for highly contiguous assemblies. | Tool | Speed | Memory | Best For | |------|------...
bio-single-cell-data-io
Reference examples tested with: Cell Ranger 8.0+, anndata 0.10+, numpy 1.26+, pandas 2.2+, scanpy 1.10+ Before using code patterns, verify installed v...