Search Skills
Search across 54932 indexed skills
bio-ribo-seq-ribosome-stalling
Reference examples tested with: BioPython 1.83+, numpy 1.26+, scipy 1.12+ Before using code patterns, verify installed versions match. If versions dif...
bio-causal-genomics-colocalization-analysis
Reference examples tested with: ggplot2 3.5+ Before using code patterns, verify installed versions match. If versions differ: R: packageVersion('<pkg>...
chembl-database
ChEMBL is a manually curated database of bioactive molecules maintained by the European Bioinformatics Institute (EBI), containing over 2 million comp...
gtex-database
The Genotype-Tissue Expression (GTEx) project provides a comprehensive resource for studying tissue-specific gene expression and genetic regulation ac...
bio-longread-medaka
Reference examples tested with: bcftools 1.19+, minimap2 2.26+, samtools 1.19+ Before using code patterns, verify installed versions match. If version...
tooluniverse-rare-disease-diagnosis
Systematic diagnosis support for rare diseases using phenotype matching, gene panel prioritization, and variant interpretation across Orphanet, OMIM, ...
bio-small-rna-seq-mirge3-analysis
miRge3.0 annotate \ -s sample1.fastq.gz,sample2.fastq.gz \ -lib miRge3libs \ -on human \ -db mirbase \ -o outputdir \ -a TGGAATTCTCGGGTGCCAAGG \ --thr...
bio-fragment-analysis
Reference examples tested with: numpy 1.26+, pandas 2.2+, pysam 0.22+ Before using code patterns, verify installed versions match. If versions differ:...
bio-genome-assembly-assembly-polishing
Improve assembly accuracy by correcting errors using additional sequencing data. | Tool | Input Reads | Best For | |------|-------------|----------| |...
pdf-anthropic
This guide covers essential PDF processing operations using Python libraries and command-line tools. For advanced features, JavaScript libraries, and ...
drug-interaction-checker
This skill analyzes a list of medications to identify known interactions, focusing on safety and contraindications. Reviewing patient medication lists...
bio-epitranscriptomics-merip-preprocessing
STAR --runMode genomeGenerate \ --genomeDir starindex \ --genomeFastaFiles genome.fa \ --sjdbGTFfile genes.gtf for sample in IPrep1 IPrep2 Inputrep1 I...